Publications in peer-reviewed journals



Dimitrakopoulou M. E., Kotsalou C., Stavrou V., Vantarakis A., (2021) “Advancing quality control of food samples by Next Generation Sequencing compared to culture-dependent techniques”, Journal of Food Science and Nutrition Research.  


Garagounis C., Delkis N., Papadopoulou K., (2021) “Unraveling the roles of plant specialized metabolites: using synthetic biology to design molecular biosensors”, New Phytologist.


Bayega A., Oikonomopoulos S., Gregoriou M. E., Tsoumani K., Giakountis  A., Wang  C. Y., Mathiopoulos  K. D., Ragoussis J., (2021) “Nanopore long-read RNA-seq and absolute quantification delineate transcription dynamics in early embryo development of an insect pest”, Scientific Reports. 10.1038/s41598-021-86753-7



Zarafeta D., Galanopoulou A. P., Leni M. E., Kaili S. I., Chegkazi M. S., Chrysina E. D., Kolisis F. N., Hatzinikolaou D. G. and Skretas G., (2020) “XynDZ5: A New Thermostable GH10 Xylanase”, Frontiers in Microbiology.


Michou M., Stergios A., Skretas G., (2020) “SuptoxD2.0: A second‐generation engineered Escherichia coli strain achieving further enhanced levels of recombinant membrane protein production”, Biotechnology and Bioengineering.


Agioutantis P, Loutrari H, Kolisis F. (2020) “Computational Analysis of Transcriptomic and Proteomic Data for Deciphering Molecular Heterogeneity and Drug Responsiveness in Model Human Hepatocellular Carcinoma Cell Lines”, Genes.

Garagounis C., Beritza K., Georgopoulou M.-E., Sonawane P., Haralampidis K., Goossens A., Aharoni A., Papadopoulou K.K., "A hairy-root transformation protocol for Trigonella foenum-graecum L. as a tool for metabolic engineering and specialised metabolite pathway elucidation", Plant Physiology et Biochemistry.

Garagounis C., Georgopoulou M. E., Beritza K., Papadopoulou K., "An Agrobacterium rhizogenes mediated hairy root transformation protocol for fenugreek", Elsevier, MethodsX.


Vasilopoulos V., Pitou M., Fekas I., Papi R., Ouranidis A., Pavlidou E., Patsalas P., Choli-Papadopoulou T., (2020) "Graphene-Wrapped Copper Nanoparticles: An Antimicrobial and Biocompatible Nanomaterial with Valuable Properties for Medical Uses", ACS Omega.  


Konstantinou Ε., Zagoriti Ζ., Pyriochou Α., Poulas Κ., (2020) "Microcurrent Stimulation Triggers MAPK Signaling and TGF-β1 Release in Fibroblast and Osteoblast-Like Cell Lines", Cells.

Storck V., Gallego S., Vasileiadis S., Hussain S., Béguet I., Rouard N., Baguelin C., Perruchon C., Devers-Lamrani M., Karpouzas D., Martin-Laurent F., (2020) “Insights into the Function and Horizontal Transfer of Isoproturon Degradation Genes (pdmAB) in a Biobed System”, ASM Applied and Environmental Microbiology. 10.1128/AEM.00474-20    

Perruchon C, Vasileiadis S, Papadopoulou S, Karpouzas D. (2020) "Genome-based metabolic reconstruction unravels the key role of B12 in methionine auxotrophy of an ortho-phenylphenol-degrading Sphingomonas haloaromaticamans", Frontiers in Microbiology.

Agioutantis P, Kotsikoris V, Kolisis F, Loutrari H. (2020) " RNA-seq data analysis of stimulated hepatocellular carcinoma cells treated with epigallocatechin gallate and fisetin reveals target genes and action mechanisms". Computational and Structural Biotechnology




Giannakopoulou A, Patila M, Spyrou K , Chalmpes N, Zarafeta D, Skretas G, Gournis D, Stamatis H. (2019) "Development of a Four-Enzyme Magnetic Nanobiocatalyst for Multi-Step Cascade Reactions". CATALYSTS


Michou M, Kapsalis C, Pliotas C, Skretas G. (2019) "Optimization of Recombinant Membrane Protein Production inthe Engineered Escherichia coli Strains SuptoxD and SuptoxR". ACS Synthetic Biology 10.1021/acssynbio.9b00120

Daras G, Rigas S, Alatzas A, Kostourou V, Panayotou G, Hatzopoulos P. (2019) "LEFKOTHEA regulates Nuclear and Chloroplast mRNA splicing in Plants". Developmental Cell 50, 1-13, 2019.


G. Orfanakis, M. Patila, A.V. Chatzikonstantinou, K-M. Lyra, A. Kouloumpis, P. Katapodis, K. Spyrou, A. Paipetis, P. Rudolf, D. Gournis, H. Stamatis (2018) "Hybrid nanomaterials of magnetic iron nanoparticles and graphene oxide as matrices for the immobilization of ß-glucosidase: Synthesis, characterization and biocatalytic properties". Frontiers in Materials, April 2018 | Volume 5 | Article 25, 1-15, 2018

M. Patila, E.K. Diamanti, D. Bergouni, A.C. Polydera, D. Gournis, H.  Stamatis (2018) “Preparation and biochemical characterisation of nanoconjugates of functionalized carbon nanotubes and cytochrome c”. Nanomedicine Research Journal 10.22034/nmrj.2018.01.002

AV. Chatzikonstantinou, E. Gkantzou, D. Gournis, M. Patila, H. Stamatis (2018) "Stabilization of laccase through immobilization on functionalized GO-derivatives". Methods in Enzymology 48-80, 609, 2018

E. Gkantzou, M. Patila, H. Stamatis (2018) "Magnetic microreactors with immobilized enzymes - from assemblage to contemporary applications". Catalysts, 8, 282; 1-16

Aikaterini G Karra, Maria Konstantinou, Maria Tzortziou, Ioannis Tsialtas, Foteini Kalousi, Constantine Garagounis, Joseph M. Hayes, and Anna-Maria G. Psarra (2018) "Potential dissociative glucocorticoid receptor activity for protopanaxadiol and protopanaxatriol". International Journal of Molecular Science. 20(1), 94 10.3390/ijms20010094